Label20120920-143918
Motivation Examine effects of using NetStimFD in place of gen
OutcomeActivity dies out after a few thousand milliseconds.
Date20/09/2012
Time14:39:18
Duration116.58 s
Launch modedistributed, n=

Code

Executable Repository Version Main file Arguments
Python 2.7.1 (/home/andrew/env/pyNN-0.7/bin/python) https://bitbucket.org/apdavison/destexhe_jcns_2009 5eba58243eb4 demo_cx05_N=500b_LTS.py

Dependencies

NamePathVersion
distutils/home/andrew/env/pyNN-0.7/lib/python2.7/distutils2.7.1
encodings/home/andrew/env/pyNN-0.7/lib/python2.7/encodingsunknown
neuron/home/andrew/env/pyNN-0.7/lib/python2.7/site-packages/neuronunknown
nose/usr/lib/pymodules/python2.7/nose0.11.4
numpy/usr/lib/pymodules/python2.7/numpy1.5.1
pyNN/home/andrew/env/pyNN-0.7/lib/python2.7/site-packages/pyNN1219
scipy/usr/lib/python2.7/dist-packages/scipy0.8.0

Inputs

Outputs

Output files

20120920-143918/Vm0_cx05_LTS500b.dat 676695a03d81a3c16ba13b7b45535ed9f19f991f text/plain 749.6 KB
20120920-143918/Vm170_cx05_LTS500b.dat 4b0457a1bcab8a51fd100a5130d2f5f92db56dd3 text/plain 753.3 KB
20120920-143918/Vm99_cx05_LTS500b.dat 5b9485e77f94a28c8e5deff4ca4155c4bf225b60 text/plain 751.5 KB
20120920-143918/numspikes_cx05_LTS500b.dat 9d6774fd6ce1db26b0c5657377dbed61542a7347 text/plain 1.2 KB
20120920-143918/spiketimes_cx05_LTS500b.dat 49080085b7698f62a6ed9a1cf45d8bddb86c00e8 text/plain 63.7 KB

Stdout & Stderr

MPI_Initialized==false, disabling MPI functionality.
NEURON -- Release 7.1 (359:7f113b76a94b) 2009-10-26
Duke, Yale, and the BlueBrain Project -- Copyright 1984-2008
See http://www.neuron.yale.edu/credits.html

NEURON: unable to open font "*helvetica-medium-r-normal*--14*", using "fixed"
	1 
loading membrane mechanisms from /home/andrew/env/pyNN-0.7/lib/python2.7/site-packages/pyNN/neuron/nmodl/x86_64/.libs/libnrnmech.so
Additional mechanisms from files
 adexp.mod alphaisyn.mod alphasyn.mod expisyn.mod gsfa_grr.mod hh_traub.mod netstim2.mod refrac.mod reset.mod stdwa_guetig.mod stdwa_softlimits.mod stdwa_songabbott.mod stdwa_symm.mod tmgsyn.mod tmisyn.mod vecstim.mod

=======================================================================
            Network of  500 IF neurons in an active state
=======================================================================

----[ CREATING CELLS ]----
Cell  116  is LTS
Cell  156  is LTS
Cell  167  is LTS
Cell  207  is LTS
Cell  228  is LTS
Cell  238  is LTS
Cell  243  is LTS
Cell  254  is LTS
Cell  299  is LTS
Cell  341  is LTS
Cell  352  is LTS
Cell  387  is LTS
Cell  399  is LTS
----[ CREATING NETWORK ]----
Calculate connectivity of cortical cells...
MEAN SYNAPSES PER NEURON:
cortical excitatory inputs  29.95
cortical inhibitory inputs  6.934
----[ ADDING NETWORK INPUT ]----
Add stimulation of cortical neurons...
>>> Writing spikes to file...
Mean rate per RS cell (Hz) =  2.7895
 standard deviation =  3.27316204151
Mean rate per FS cell (Hz) =  3.146
 standard deviation =  3.66353435906
>>> 

Environment

NameIP addressProcessor ArchitectureSystem type ReleaseVersion
retina 127.0.1.1 x86_64 x86_64 64bit ELF Linux 2.6.38-11-generic #50-Ubuntu SMP Mon Sep 12 21:17:25 UTC 2011